I'll go for a Top 5. By the way, I've only played OoT, MM, TWW, TP, PH, and ST.
Bosses
5. Odolwa- MM
4. Phantom Ganon- OoT
3. Stallord- TP
2. Zant- TP
1. Dark Lord, Ganondorf, TP
Minibosses
5. Aerofol- TP
4. Gekko 2nd Fight- MM
3. Phantom Ganon- WW
2. Darknut- TP
1. Dark Link- OoT
