Hyrule in The Wind Waker being un-destroyed/flooded after Daphnes' death, due to the statement in A Link to the Past about how wishes granted by the Triforce are undone after the one who makes the wish is destroyed. It's not a theory I'm particularly invested in, necessarily, but it's something I ponder from time to time, and would be pretty ok with it if a game were placed on the "timeline" after The Wind Waker in this manner. Maybe that's what Breath of the Wild is