that is just like a sketch is way deeper what they created Din created the red earth and gave fertility to it Nayru gave color to the world and established laws and rules and finally Farore created life on earth and established Hyrule for people follow those rules and finally all together...
you can see clearly in OoT is the location in which the tree is you can even see the entrance to the hallway in which you get trough him and the Kokiri
and Farore only gavel ife to the red earth and created people to follow the rules and laws that Nayru had stablished
I agree but i believe we might see the Deku TRee since he was created by Farore since the begging of time. In OoT you can see how she leaves to the sky and behind her is the DEku Tree