Favorite to least.
I dig all of em, so I can't bring myself to call any of em the "worst".
I know these opinions aren't popular, so I can see the confusion.
My list would be something like:
Skyward Sword
Breath of the Wild
A Link to the Past
Minish Cap
Ocarina of Time
Adventure of Link
The Legend of Zelda
The Windwaker
Oracle of Ages/Seasons
Twilight Princess
Link's Awakening
Majora's Mask
I don't flat-out dislike any of em, which makes this a...